3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
Length
36 nucleotides
Bulged bases
7K50|1|1|A|223
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7K50|1|1|G|45
7K50|1|1|G|46
*
7K50|1|1|C|179
7K50|1|1|G|180
7K50|1|1|A|181
7K50|1|1|A|182
7K50|1|1|C|183
*
7K50|1|1|G|214
7K50|1|1|G|215
7K50|1|1|A|216
7K50|1|1|A|217
7K50|1|1|A|218
7K50|1|1|A|219
7K50|1|1|G|220
7K50|1|1|A|221
7K50|1|1|A|222
7K50|1|1|A|223
7K50|1|1|U|224
*
7K50|1|1|A|231
7K50|1|1|G|232
7K50|1|1|A|233
7K50|1|1|U|234
7K50|1|1|U|235
*
7K50|1|1|A|262
7K50|1|1|G|263
7K50|1|1|C|264
7K50|1|1|A|265
7K50|1|1|G|266
*
7K50|1|1|C|426
7K50|1|1|U|427
7K50|1|1|A|428
7K50|1|1|A|429
7K50|1|1|A|430
7K50|1|1|U|431
7K50|1|1|A|432
7K50|1|1|C|433

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain D
50S ribosomal protein L34

Coloring options:

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