J6_7LS2_001
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCGAC*GGAAAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 7LS2|1|A2|A|66, 7LS2|1|C2|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS2|1|A2|G|21
7LS2|1|A2|G|22
7LS2|1|A2|C|23
7LS2|1|A2|G|24
7LS2|1|A2|A|25
7LS2|1|A2|C|26
*
7LS2|1|A2|G|57
7LS2|1|A2|G|58
7LS2|1|A2|A|59
7LS2|1|A2|A|60
7LS2|1|A2|A|61
7LS2|1|A2|A|62
7LS2|1|A2|G|63
7LS2|1|A2|A|64
7LS2|1|A2|A|65
7LS2|1|A2|A|66
7LS2|1|A2|C|67
*
7LS2|1|A2|G|74
7LS2|1|A2|G|75
7LS2|1|A2|A|76
7LS2|1|A2|U|77
7LS2|1|A2|U|78
*
7LS2|1|A2|A|105
7LS2|1|A2|A|106
7LS2|1|A2|G|107
7LS2|1|A2|A|108
7LS2|1|A2|G|109
*
7LS2|1|A2|C|332
7LS2|1|A2|U|333
7LS2|1|A2|A|334
7LS2|1|A2|A|335
7LS2|1|A2|A|336
7LS2|1|A2|U|337
7LS2|1|A2|A|338
7LS2|1|A2|C|339
*
7LS2|1|C2|G|33
7LS2|1|C2|U|34
7LS2|1|C2|C|35
Current chains
- Chain A2
- 28S rRNA
- Chain C2
- 5.8S rRNA
Nearby chains
- Chain F1
- 60S ribosomal protein L13
- Chain H1
- 60S ribosomal protein L15
- Chain b2
- 60S ribosomal protein L35
- Chain c2
- 60S ribosomal protein L36
- Chain d2
- 60S ribosomal protein L37
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