J6_7OBR_003
3D structure
- PDB id
- 7OBR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNC-SRP early complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UUGA*UUUG*CA*UGUC*GCCUCACGAUCC*GGUGUCAGAAAA
- Length
- 38 nucleotides
- Bulged bases
- 7OBR|1|5|G|3922, 7OBR|1|5|A|4376, 7OBR|1|5|A|4378, 7OBR|1|5|A|4379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OBR|1|5|U|3920
7OBR|1|5|U|3921
7OBR|1|5|G|3922
7OBR|1|5|A|3923
*
7OBR|1|5|U|4188
7OBR|1|5|U|4189
7OBR|1|5|U|4190
7OBR|1|5|G|4191
*
7OBR|1|5|C|4204
7OBR|1|5|A|4205
*
7OBR|1|5|U|4227
7OBR|1|5|G|4228
7OBR|1|5|U|4229
7OBR|1|5|C|4230
*
7OBR|1|5|G|4331
7OBR|1|5|C|4332
7OBR|1|5|C|4333
7OBR|1|5|U|4334
7OBR|1|5|C|4335
7OBR|1|5|A|4336
7OBR|1|5|C|4337
7OBR|1|5|G|4338
7OBR|1|5|A|4339
7OBR|1|5|U|4340
7OBR|1|5|C|4341
7OBR|1|5|C|4342
*
7OBR|1|5|G|4370
7OBR|1|5|G|4371
7OBR|1|5|U|4372
7OBR|1|5|G|4373
7OBR|1|5|U|4374
7OBR|1|5|C|4375
7OBR|1|5|A|4376
7OBR|1|5|G|4377
7OBR|1|5|A|4378
7OBR|1|5|A|4379
7OBR|1|5|A|4380
7OBR|1|5|A|4381
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain N
- Ribosomal protein L15
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- uL15
- Chain b
- 60S ribosomal protein L29
- Chain o
- eL42
Coloring options: