J6_7OHW_003
3D structure
- PDB id
- 7OHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAGUUUCCCUCAGGAUAG*UGGG*CGAUGC*GAACG*CC*GAGUAG
- Length
- 43 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHW|1|1|C|949
7OHW|1|1|G|950
7OHW|1|1|A|951
7OHW|1|1|A|952
7OHW|1|1|G|953
7OHW|1|1|U|954
7OHW|1|1|U|955
7OHW|1|1|U|956
7OHW|1|1|C|957
7OHW|1|1|C|958
7OHW|1|1|C|959
7OHW|1|1|U|960
7OHW|1|1|C|961
7OHW|1|1|A|962
7OHW|1|1|G|963
7OHW|1|1|G|964
7OHW|1|1|A|965
7OHW|1|1|U|966
7OHW|1|1|A|967
7OHW|1|1|G|968
*
7OHW|1|1|U|1114
7OHW|1|1|G|1115
7OHW|1|1|G|1116
7OHW|1|1|G|1117
*
7OHW|1|1|C|1141
7OHW|1|1|G|1142
7OHW|1|1|A|1143
7OHW|1|1|U|1144
7OHW|1|1|G|1145
7OHW|1|1|C|1146
*
7OHW|1|1|G|1157
7OHW|1|1|A|1158
7OHW|1|1|A|1159
7OHW|1|1|C|1160
7OHW|1|1|G|1161
*
7OHW|1|1|C|1338
7OHW|1|1|C|1339
*
7OHW|1|1|G|1365
7OHW|1|1|A|1366
7OHW|1|1|G|1367
7OHW|1|1|U|1368
7OHW|1|1|A|1369
7OHW|1|1|G|1370
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: