J6_7OOD_001
3D structure
- PDB id
- 7OOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GG*CAAUAC*GGAAAAGAAAA*UGAUU*AACAG*CUAAAUAC
- Length
- 37 nucleotides
- Bulged bases
- 7OOD|1|3|U|185, 7OOD|1|3|A|227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OOD|1|3|G|47
7OOD|1|3|G|48
*
7OOD|1|3|C|182
7OOD|1|3|A|183
7OOD|1|3|A|184
7OOD|1|3|U|185
7OOD|1|3|A|186
7OOD|1|3|C|187
*
7OOD|1|3|G|218
7OOD|1|3|G|219
7OOD|1|3|A|220
7OOD|1|3|A|221
7OOD|1|3|A|222
7OOD|1|3|A|223
7OOD|1|3|G|224
7OOD|1|3|A|225
7OOD|1|3|A|226
7OOD|1|3|A|227
7OOD|1|3|A|228
*
7OOD|1|3|U|235
7OOD|1|3|G|236
7OOD|1|3|A|237
7OOD|1|3|U|238
7OOD|1|3|U|239
*
7OOD|1|3|A|266
7OOD|1|3|A|267
7OOD|1|3|C|268
7OOD|1|3|A|269
7OOD|1|3|G|270
*
7OOD|1|3|C|462
7OOD|1|3|U|463
7OOD|1|3|A|464
7OOD|1|3|A|465
7OOD|1|3|A|466
7OOD|1|3|U|467
7OOD|1|3|A|468
7OOD|1|3|C|469
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain c
- 50S ribosomal protein L4
Coloring options: