J6_7OSA_003
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAGUAC*GGAAAAGAAAC*GGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 7OSA|1|25S|A|67, 7OSA|1|25S|U|329, 7OSA|1|58S|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSA|1|25S|G|22
7OSA|1|25S|A|23
7OSA|1|25S|G|24
7OSA|1|25S|U|25
7OSA|1|25S|A|26
7OSA|1|25S|C|27
*
7OSA|1|25S|G|58
7OSA|1|25S|G|59
7OSA|1|25S|A|60
7OSA|1|25S|A|61
7OSA|1|25S|A|62
7OSA|1|25S|A|63
7OSA|1|25S|G|64
7OSA|1|25S|A|65
7OSA|1|25S|A|66
7OSA|1|25S|A|67
7OSA|1|25S|C|68
*
7OSA|1|25S|G|75
7OSA|1|25S|G|76
7OSA|1|25S|A|77
7OSA|1|25S|U|78
7OSA|1|25S|U|79
*
7OSA|1|25S|A|106
7OSA|1|25S|A|107
7OSA|1|25S|A|108
7OSA|1|25S|A|109
7OSA|1|25S|G|110
*
7OSA|1|25S|C|321
7OSA|1|25S|U|322
7OSA|1|25S|A|323
7OSA|1|25S|A|324
7OSA|1|25S|A|325
7OSA|1|25S|U|326
7OSA|1|25S|A|327
7OSA|1|25S|U|328
7OSA|1|25S|U|329
7OSA|1|25S|G|330
7OSA|1|25S|G|331
*
7OSA|1|58S|C|32
7OSA|1|58S|A|33
7OSA|1|58S|U|34
7OSA|1|58S|C|35
Current chains
- Chain 25S
- 25S rRNA
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain eL13
- 60S ribosomal protein L13
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL36
- 60S ribosomal protein L36-A
- Chain eL37
- Ribosomal protein L37
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: