J6_7OSA_004
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUGA*UUUG*CA*UGUC*GCCUAUCGAUCC*GGUGCCAGAAAA
- Length
- 38 nucleotides
- Bulged bases
- 7OSA|1|25S|G|2418, 7OSA|1|25S|C|2760, 7OSA|1|25S|A|2799, 7OSA|1|25S|A|2801, 7OSA|1|25S|A|2802
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSA|1|25S|U|2416
7OSA|1|25S|U|2417
7OSA|1|25S|G|2418
7OSA|1|25S|A|2419
*
7OSA|1|25S|U|2611
7OSA|1|25S|U|2612
7OSA|1|25S|U|2613
7OSA|1|25S|G|2614
*
7OSA|1|25S|C|2627
7OSA|1|25S|A|2628
*
7OSA|1|25S|U|2650
7OSA|1|25S|G|2651
7OSA|1|25S|U|2652
7OSA|1|25S|C|2653
*
7OSA|1|25S|G|2754
7OSA|1|25S|C|2755
7OSA|1|25S|C|2756
7OSA|1|25S|U|2757
7OSA|1|25S|A|2758
7OSA|1|25S|U|2759
7OSA|1|25S|C|2760
7OSA|1|25S|G|2761
7OSA|1|25S|A|2762
7OSA|1|25S|U|2763
7OSA|1|25S|C|2764
7OSA|1|25S|C|2765
*
7OSA|1|25S|G|2793
7OSA|1|25S|G|2794
7OSA|1|25S|U|2795
7OSA|1|25S|G|2796
7OSA|1|25S|C|2797
7OSA|1|25S|C|2798
7OSA|1|25S|A|2799
7OSA|1|25S|G|2800
7OSA|1|25S|A|2801
7OSA|1|25S|A|2802
7OSA|1|25S|A|2803
7OSA|1|25S|A|2804
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain PSIT
- Transfer RNA; tRNA
- Chain eL15
- 60S ribosomal protein L15-A
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL21
- BJ4_G0003770.mRNA.1.CDS.1
- Chain eL29
- 60S ribosomal protein L29
- Chain eL42
- BJ4_G0001880.mRNA.1.CDS.1
- Chain uL15
- 60S ribosomal protein L28
- Chain uL2
- 60S ribosomal protein L2-B
Coloring options: