J6_7OSA_005
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGAACUUUG*UUUCCUU*GACUUU*AUAGAAUAGGA*UAAUGAUUAAUA*UA
- Length
- 47 nucleotides
- Bulged bases
- 7OSA|1|18S|U|639, 7OSA|1|18S|U|694, 7OSA|1|18S|C|696, 7OSA|1|18S|C|697, 7OSA|1|18S|U|813, 7OSA|1|18S|G|815, 7OSA|1|18S|A|856, 7OSA|1|18S|U|864
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OSA|1|18S|U|633
7OSA|1|18S|G|634
7OSA|1|18S|A|635
7OSA|1|18S|A|636
7OSA|1|18S|C|637
7OSA|1|18S|U|638
7OSA|1|18S|U|639
7OSA|1|18S|U|640
7OSA|1|18S|G|641
*
7OSA|1|18S|U|693
7OSA|1|18S|U|694
7OSA|1|18S|U|695
7OSA|1|18S|C|696
7OSA|1|18S|C|697
7OSA|1|18S|U|698
7OSA|1|18S|U|699
*
7OSA|1|18S|G|739
7OSA|1|18S|A|740
7OSA|1|18S|C|741
7OSA|1|18S|U|742
7OSA|1|18S|U|743
7OSA|1|18S|U|744
*
7OSA|1|18S|A|807
7OSA|1|18S|U|808
7OSA|1|18S|A|809
7OSA|1|18S|G|810
7OSA|1|18S|A|811
7OSA|1|18S|A|812
7OSA|1|18S|U|813
7OSA|1|18S|A|814
7OSA|1|18S|G|815
7OSA|1|18S|G|816
7OSA|1|18S|A|817
*
7OSA|1|18S|U|854
7OSA|1|18S|A|855
7OSA|1|18S|A|856
7OSA|1|18S|U|857
7OSA|1|18S|G|858
7OSA|1|18S|A|859
7OSA|1|18S|U|860
7OSA|1|18S|U|861
7OSA|1|18S|A|862
7OSA|1|18S|A|863
7OSA|1|18S|U|864
7OSA|1|18S|A|865
*
7OSA|1|18S|U|965
7OSA|1|18S|A|966
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eL19
- 60S ribosomal protein L19-A
- Chain eS27
- 40S ribosomal protein S27-A
- Chain eS7
- 40S ribosomal protein S7
- Chain uS12
- 40S ribosomal protein S23
- Chain uS15
- 40S ribosomal protein S13
- Chain uS17
- 40S ribosomal protein S11-B
- Chain uS8
- 40S ribosomal protein S22-A
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