J6_7PIA_001
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- AUAGG*CAAUAC*GGAAAAGAAAA*UGAUUC*GAACAG*CUAAAUACUAAU
- Length
- 46 nucleotides
- Bulged bases
- 7PIA|1|3|U|185, 7PIA|1|3|A|227
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PIA|1|3|A|44
7PIA|1|3|U|45
7PIA|1|3|A|46
7PIA|1|3|G|47
7PIA|1|3|G|48
*
7PIA|1|3|C|182
7PIA|1|3|A|183
7PIA|1|3|A|184
7PIA|1|3|U|185
7PIA|1|3|A|186
7PIA|1|3|C|187
*
7PIA|1|3|G|218
7PIA|1|3|G|219
7PIA|1|3|A|220
7PIA|1|3|A|221
7PIA|1|3|A|222
7PIA|1|3|A|223
7PIA|1|3|G|224
7PIA|1|3|A|225
7PIA|1|3|A|226
7PIA|1|3|A|227
7PIA|1|3|A|228
*
7PIA|1|3|U|235
7PIA|1|3|G|236
7PIA|1|3|A|237
7PIA|1|3|U|238
7PIA|1|3|U|239
7PIA|1|3|C|240
*
7PIA|1|3|G|265
7PIA|1|3|A|266
7PIA|1|3|A|267
7PIA|1|3|C|268
7PIA|1|3|A|269
7PIA|1|3|G|270
*
7PIA|1|3|C|462
7PIA|1|3|U|463
7PIA|1|3|A|464
7PIA|1|3|A|465
7PIA|1|3|A|466
7PIA|1|3|U|467
7PIA|1|3|A|468
7PIA|1|3|C|469
7PIA|1|3|U|470
7PIA|1|3|A|471
7PIA|1|3|A|472
7PIA|1|3|U|473
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain k
- 50S ribosomal protein L15
Coloring options: