J6_7PWO_001
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GGCGAC*GGAGGAGAAAC*GGAUU*AGGAG*CUAAAUAC*GGC
- Length
- 38 nucleotides
- Bulged bases
- 7PWO|1|1|G|24, 7PWO|1|1|A|66, 7PWO|1|42|G|35
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PWO|1|1|G|21
7PWO|1|1|G|22
7PWO|1|1|C|23
7PWO|1|1|G|24
7PWO|1|1|A|25
7PWO|1|1|C|26
*
7PWO|1|1|G|57
7PWO|1|1|G|58
7PWO|1|1|A|59
7PWO|1|1|G|60
7PWO|1|1|G|61
7PWO|1|1|A|62
7PWO|1|1|G|63
7PWO|1|1|A|64
7PWO|1|1|A|65
7PWO|1|1|A|66
7PWO|1|1|C|67
*
7PWO|1|1|G|74
7PWO|1|1|G|75
7PWO|1|1|A|76
7PWO|1|1|U|77
7PWO|1|1|U|78
*
7PWO|1|1|A|103
7PWO|1|1|G|104
7PWO|1|1|G|105
7PWO|1|1|A|106
7PWO|1|1|G|107
*
7PWO|1|1|C|272
7PWO|1|1|U|273
7PWO|1|1|A|274
7PWO|1|1|A|275
7PWO|1|1|A|276
7PWO|1|1|U|277
7PWO|1|1|A|278
7PWO|1|1|C|279
*
7PWO|1|42|G|34
7PWO|1|42|G|35
7PWO|1|42|C|36
Current chains
- Chain 1
- rRNA 28S
- Chain 42
- rRNA 5.8S
Nearby chains
- Chain C2
- Ribosomal protein L4
- Chain L2
- 60S ribosomal protein L13
- Chain N2
- Ribosomal protein L15
- Chain h2
- Ribosomal protein L35
- Chain i2
- Ribosomal protein L36-1
- Chain j2
- Ribosomal protein L37
Coloring options: