J6_7QCA_001
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GAC*GAGUAC*GGAAAAGAAAC*GGAUU*AACAG*CUAAAUAC
- Length
- 38 nucleotides
- Bulged bases
- 7QCA|1|L50|A|34, 7QCA|1|L50|A|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|L50|G|33
7QCA|1|L50|A|34
7QCA|1|L50|C|35
*
7QCA|1|L50|G|114
7QCA|1|L50|A|115
7QCA|1|L50|G|116
7QCA|1|L50|U|117
7QCA|1|L50|A|118
7QCA|1|L50|C|119
*
7QCA|1|L50|G|150
7QCA|1|L50|G|151
7QCA|1|L50|A|152
7QCA|1|L50|A|153
7QCA|1|L50|A|154
7QCA|1|L50|A|155
7QCA|1|L50|G|156
7QCA|1|L50|A|157
7QCA|1|L50|A|158
7QCA|1|L50|A|159
7QCA|1|L50|C|160
*
7QCA|1|L50|G|167
7QCA|1|L50|G|168
7QCA|1|L50|A|169
7QCA|1|L50|U|170
7QCA|1|L50|U|171
*
7QCA|1|L50|A|198
7QCA|1|L50|A|199
7QCA|1|L50|C|200
7QCA|1|L50|A|201
7QCA|1|L50|G|202
*
7QCA|1|L50|C|368
7QCA|1|L50|U|369
7QCA|1|L50|A|370
7QCA|1|L50|A|371
7QCA|1|L50|A|372
7QCA|1|L50|U|373
7QCA|1|L50|A|374
7QCA|1|L50|C|375
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LHH
- Ribosomal L29 protein
- Chain LJJ
- eL37 LJJ
- Chain LL0
- 60S ribosomal protein L13
- Chain LN0
- Ribosomal protein L15
- Chain LX0
- 60S ribosomal protein L23a
Coloring options: