J6_7QCA_002
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAAAU*AG*UGGG*CGAAGA*UGGCA*UUAGCAGGUAG
- Length
- 34 nucleotides
- Bulged bases
- 7QCA|1|L50|G|815, 7QCA|1|L50|C|1034
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QCA|1|L50|C|700
7QCA|1|L50|G|701
7QCA|1|L50|A|702
7QCA|1|L50|A|703
7QCA|1|L50|A|704
7QCA|1|L50|U|705
*
7QCA|1|L50|A|718
7QCA|1|L50|G|719
*
7QCA|1|L50|U|813
7QCA|1|L50|G|814
7QCA|1|L50|G|815
7QCA|1|L50|G|816
*
7QCA|1|L50|C|840
7QCA|1|L50|G|841
7QCA|1|L50|A|842
7QCA|1|L50|A|843
7QCA|1|L50|G|844
7QCA|1|L50|A|845
*
7QCA|1|L50|U|856
7QCA|1|L50|G|857
7QCA|1|L50|G|858
7QCA|1|L50|C|859
7QCA|1|L50|A|860
*
7QCA|1|L50|U|1030
7QCA|1|L50|U|1031
7QCA|1|L50|A|1032
7QCA|1|L50|G|1033
7QCA|1|L50|C|1034
7QCA|1|L50|A|1035
7QCA|1|L50|G|1036
7QCA|1|L50|G|1037
7QCA|1|L50|U|1038
7QCA|1|L50|A|1039
7QCA|1|L50|G|1040
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LAA
- uL15 LAA
- Chain LC0
- 60S ribosomal protein L4
- Chain LE0
- 60S ribosomal protein L6
- Chain LEE
- 60S ribosomal protein L32
- Chain LF0
- 60S ribosomal protein L7
- Chain LFF
- 60S ribosomal protein L35a
- Chain LL0
- 60S ribosomal protein L13
- Chain LQ0
- 60S ribosomal protein L18
- Chain LT0
- 60s ribosomal protein L21
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