3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
7QGH|1|N|U|2076, 7QGH|1|N|A|2388, 7QGH|1|N|U|2390, 7QGH|1|N|G|2428, 7QGH|1|N|A|2430, 7QGH|1|N|U|2431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QGH|1|N|U|2074
7QGH|1|N|U|2075
7QGH|1|N|U|2076
7QGH|1|N|A|2077
*
7QGH|1|N|U|2243
7QGH|1|N|U|2244
7QGH|1|N|U|2245
7QGH|1|N|G|2246
*
7QGH|1|N|C|2258
7QGH|1|N|U|2259
*
7QGH|1|N|A|2281
7QGH|1|N|G|2282
7QGH|1|N|C|2283
7QGH|1|N|A|2284
*
7QGH|1|N|U|2384
7QGH|1|N|C|2385
7QGH|1|N|A|2386
7QGH|1|N|U|2387
7QGH|1|N|A|2388
7QGH|1|N|G|2389
7QGH|1|N|U|2390
7QGH|1|N|G|2391
7QGH|1|N|A|2392
7QGH|1|N|U|2393
7QGH|1|N|C|2394
7QGH|1|N|C|2395
*
7QGH|1|N|G|2421
7QGH|1|N|C|2422
7QGH|1|N|U|2423
7QGH|1|N|C|2424
7QGH|1|N|A|2425
7QGH|1|N|A|2426
7QGH|1|N|C|2427
7QGH|1|N|G|2428
7QGH|1|N|G|2429
7QGH|1|N|A|2430
7QGH|1|N|U|2431
7QGH|1|N|A|2432
7QGH|1|N|A|2433
7QGH|1|N|A|2434
7QGH|1|N|A|2435

Current chains

Chain N
23S rRNA

Nearby chains

Chain P
50S ribosomal protein L2
Chain Y
50S ribosomal protein L15
Chain j
50S ribosomal protein L27
Chain k
50S ribosomal protein L28
Chain o
50S ribosomal protein L33
Chain q
50S ribosomal protein L35

Coloring options:

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