3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
7QGU|1|A|U|2105, 7QGU|1|A|U|2419, 7QGU|1|A|G|2457, 7QGU|1|A|A|2459, 7QGU|1|A|U|2460
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QGU|1|A|U|2103
7QGU|1|A|U|2104
7QGU|1|A|U|2105
7QGU|1|A|A|2106
*
7QGU|1|A|U|2272
7QGU|1|A|U|2273
7QGU|1|A|U|2274
7QGU|1|A|G|2275
*
7QGU|1|A|C|2287
7QGU|1|A|G|2288
*
7QGU|1|A|C|2310
7QGU|1|A|G|2311
7QGU|1|A|C|2312
7QGU|1|A|C|2313
*
7QGU|1|A|G|2413
7QGU|1|A|C|2414
7QGU|1|A|U|2415
7QGU|1|A|U|2416
7QGU|1|A|A|2417
7QGU|1|A|G|2418
7QGU|1|A|U|2419
7QGU|1|A|G|2420
7QGU|1|A|A|2421
7QGU|1|A|U|2422
7QGU|1|A|C|2423
7QGU|1|A|C|2424
*
7QGU|1|A|G|2450
7QGU|1|A|C|2451
7QGU|1|A|U|2452
7QGU|1|A|C|2453
7QGU|1|A|A|2454
7QGU|1|A|A|2455
7QGU|1|A|C|2456
7QGU|1|A|G|2457
7QGU|1|A|G|2458
7QGU|1|A|A|2459
7QGU|1|A|U|2460
7QGU|1|A|A|2461
7QGU|1|A|A|2462
7QGU|1|A|A|2463
7QGU|1|A|A|2464

Current chains

Chain A
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain L
50S ribosomal protein L15
Chain V
50S ribosomal protein L27
Chain Y
50S ribosomal protein L28
Chain c
50S ribosomal protein L33
Chain e
50S ribosomal protein L35

Coloring options:

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