J6_7S0S_001

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GC*GGAAC*GGAAGAGAAAA*UGAUU*AGGAUG*CUGAAUAC

Length

37 nucleotides

Bulged bases

7S0S|1|C|A|222, 7S0S|1|C|U|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S0S|1|C|G|42
7S0S|1|C|C|43
*
7S0S|1|C|G|178
7S0S|1|C|G|179
7S0S|1|C|A|180
7S0S|1|C|A|181
7S0S|1|C|C|182
*
7S0S|1|C|G|213
7S0S|1|C|G|214
7S0S|1|C|A|215
7S0S|1|C|A|216
7S0S|1|C|G|217
7S0S|1|C|A|218
7S0S|1|C|G|219
7S0S|1|C|A|220
7S0S|1|C|A|221
7S0S|1|C|A|222
7S0S|1|C|A|223
*
7S0S|1|C|U|231
7S0S|1|C|G|232
7S0S|1|C|A|233
7S0S|1|C|U|234
7S0S|1|C|U|235
*
7S0S|1|C|A|262
7S0S|1|C|G|263
7S0S|1|C|G|264
7S0S|1|C|A|265
7S0S|1|C|U|266
7S0S|1|C|G|267
*
7S0S|1|C|C|514
7S0S|1|C|U|515
7S0S|1|C|G|516
7S0S|1|C|A|517
7S0S|1|C|A|518
7S0S|1|C|U|519
7S0S|1|C|A|520
7S0S|1|C|C|521

Current chains

Chain C

23S rRNA

Nearby chains

Chain e

50S ribosomal protein L34