J6_7S1H_001

3D structure

PDB id

7S1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic linezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7S1H|1|I|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7S1H|1|I|G|45
7S1H|1|I|G|46
*
7S1H|1|I|C|179
7S1H|1|I|G|180
7S1H|1|I|A|181
7S1H|1|I|A|182
7S1H|1|I|C|183
*
7S1H|1|I|G|214
7S1H|1|I|G|215
7S1H|1|I|A|216
7S1H|1|I|A|217
7S1H|1|I|A|218
7S1H|1|I|A|219
7S1H|1|I|G|220
7S1H|1|I|A|221
7S1H|1|I|A|222
7S1H|1|I|A|223
7S1H|1|I|U|224
*
7S1H|1|I|A|231
7S1H|1|I|G|232
7S1H|1|I|A|233
7S1H|1|I|U|234
7S1H|1|I|U|235
*
7S1H|1|I|A|262
7S1H|1|I|G|263
7S1H|1|I|C|264
7S1H|1|I|A|265
7S1H|1|I|G|266
*
7S1H|1|I|C|426
7S1H|1|I|U|427
7S1H|1|I|A|428
7S1H|1|I|A|429
7S1H|1|I|A|430
7S1H|1|I|U|431
7S1H|1|I|A|432
7S1H|1|I|C|433

Current chains

Chain I

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L34