3D structure

PDB id
7S1H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic linezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.35 Å

Loop

Sequence
UUUA*UUUG*CU*AGCA*UCAUAGUGAUCC*GCUCAACGGAUAAAA
Length
41 nucleotides
Bulged bases
7S1H|1|I|U|2076, 7S1H|1|I|A|2388, 7S1H|1|I|U|2390, 7S1H|1|I|G|2428, 7S1H|1|I|A|2430, 7S1H|1|I|U|2431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7S1H|1|I|U|2074
7S1H|1|I|U|2075
7S1H|1|I|U|2076
7S1H|1|I|A|2077
*
7S1H|1|I|U|2243
7S1H|1|I|U|2244
7S1H|1|I|U|2245
7S1H|1|I|G|2246
*
7S1H|1|I|C|2258
7S1H|1|I|U|2259
*
7S1H|1|I|A|2281
7S1H|1|I|G|2282
7S1H|1|I|C|2283
7S1H|1|I|A|2284
*
7S1H|1|I|U|2384
7S1H|1|I|C|2385
7S1H|1|I|A|2386
7S1H|1|I|U|2387
7S1H|1|I|A|2388
7S1H|1|I|G|2389
7S1H|1|I|U|2390
7S1H|1|I|G|2391
7S1H|1|I|A|2392
7S1H|1|I|U|2393
7S1H|1|I|C|2394
7S1H|1|I|C|2395
*
7S1H|1|I|G|2421
7S1H|1|I|C|2422
7S1H|1|I|U|2423
7S1H|1|I|C|2424
7S1H|1|I|A|2425
7S1H|1|I|A|2426
7S1H|1|I|C|2427
7S1H|1|I|G|2428
7S1H|1|I|G|2429
7S1H|1|I|A|2430
7S1H|1|I|U|2431
7S1H|1|I|A|2432
7S1H|1|I|A|2433
7S1H|1|I|A|2434
7S1H|1|I|A|2435

Current chains

Chain I
23S rRNA

Nearby chains

Chain K
50S ribosomal protein L2
Chain T
50S ribosomal protein L15
Chain e
50S ribosomal protein L27
Chain f
50S ribosomal protein L28
Chain j
50S ribosomal protein L33
Chain l
50S ribosomal protein L35

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2108 s