J6_7TOQ_001
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCGAC*GGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUC
- Length
- 38 nucleotides
- Bulged bases
- 7TOQ|1|A25S|A|66, 7TOQ|1|A58S|U|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|G|21
7TOQ|1|A25S|G|22
7TOQ|1|A25S|C|23
7TOQ|1|A25S|G|24
7TOQ|1|A25S|A|25
7TOQ|1|A25S|C|26
*
7TOQ|1|A25S|G|57
7TOQ|1|A25S|G|58
7TOQ|1|A25S|A|59
7TOQ|1|A25S|G|60
7TOQ|1|A25S|A|61
7TOQ|1|A25S|A|62
7TOQ|1|A25S|G|63
7TOQ|1|A25S|A|64
7TOQ|1|A25S|A|65
7TOQ|1|A25S|A|66
7TOQ|1|A25S|C|67
*
7TOQ|1|A25S|G|74
7TOQ|1|A25S|G|75
7TOQ|1|A25S|A|76
7TOQ|1|A25S|U|77
7TOQ|1|A25S|U|78
*
7TOQ|1|A25S|A|105
7TOQ|1|A25S|A|106
7TOQ|1|A25S|G|107
7TOQ|1|A25S|A|108
7TOQ|1|A25S|G|109
*
7TOQ|1|A25S|C|332
7TOQ|1|A25S|U|333
7TOQ|1|A25S|A|334
7TOQ|1|A25S|A|335
7TOQ|1|A25S|A|336
7TOQ|1|A25S|U|337
7TOQ|1|A25S|A|338
7TOQ|1|A25S|C|339
*
7TOQ|1|A58S|G|33
7TOQ|1|A58S|U|34
7TOQ|1|A58S|C|35
Current chains
- Chain A25S
- 28S rRNA
- Chain A58S
- 5.8S rRNA
Nearby chains
- Chain AL13
- eL13
- Chain AL15
- 60S ribosomal protein L15
- Chain AL35
- 60S ribosomal protein L35
- Chain AL36
- 60S ribosomal protein L36
- Chain AL37
- 60S ribosomal protein L37
Coloring options: