J6_7TOQ_002
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 7TOQ|1|A25S|C|1501, 7TOQ|1|A25S|G|1502
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7TOQ|1|A25S|C|1352
7TOQ|1|A25S|G|1353
7TOQ|1|A25S|A|1354
7TOQ|1|A25S|G|1355
*
7TOQ|1|A25S|C|1384
7TOQ|1|A25S|G|1385
7TOQ|1|A25S|C|1386
7TOQ|1|A25S|A|1387
7TOQ|1|A25S|A|1388
*
7TOQ|1|A25S|U|1395
7TOQ|1|A25S|G|1396
7TOQ|1|A25S|A|1397
7TOQ|1|A25S|A|1398
7TOQ|1|A25S|G|1399
*
7TOQ|1|A25S|C|1418
7TOQ|1|A25S|G|1419
7TOQ|1|A25S|A|1420
7TOQ|1|A25S|G|1421
*
7TOQ|1|A25S|C|1464
7TOQ|1|A25S|G|1465
7TOQ|1|A25S|G|1466
*
7TOQ|1|A25S|C|1499
7TOQ|1|A25S|A|1500
7TOQ|1|A25S|C|1501
7TOQ|1|A25S|G|1502
7TOQ|1|A25S|A|1503
7TOQ|1|A25S|G|1504
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL04
- 60S ribosomal protein L4
- Chain AL13
- eL13
- Chain AL18
- eL18
- Chain AL28
- 60S ribosomal protein L27a
- Chain AL29
- eL29
- Chain AL36
- 60S ribosomal protein L36
Coloring options: