J6_7TOS_001

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7TOS|1|23S|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7TOS|1|23S|G|45
7TOS|1|23S|G|46
*
7TOS|1|23S|C|179
7TOS|1|23S|G|180
7TOS|1|23S|A|181
7TOS|1|23S|A|182
7TOS|1|23S|C|183
*
7TOS|1|23S|G|214
7TOS|1|23S|G|215
7TOS|1|23S|A|216
7TOS|1|23S|A|217
7TOS|1|23S|A|218
7TOS|1|23S|A|219
7TOS|1|23S|G|220
7TOS|1|23S|A|221
7TOS|1|23S|A|222
7TOS|1|23S|A|223
7TOS|1|23S|U|224
*
7TOS|1|23S|A|231
7TOS|1|23S|G|232
7TOS|1|23S|A|233
7TOS|1|23S|U|234
7TOS|1|23S|U|235
*
7TOS|1|23S|A|262
7TOS|1|23S|G|263
7TOS|1|23S|C|264
7TOS|1|23S|A|265
7TOS|1|23S|G|266
*
7TOS|1|23S|C|426
7TOS|1|23S|U|427
7TOS|1|23S|A|428
7TOS|1|23S|A|429
7TOS|1|23S|A|430
7TOS|1|23S|U|431
7TOS|1|23S|A|432
7TOS|1|23S|C|433

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain L34

50S ribosomal protein L34