J6_7UNV_001

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AUUAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7UNV|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UNV|1|A|G|45
7UNV|1|A|G|46
*
7UNV|1|A|C|179
7UNV|1|A|G|180
7UNV|1|A|A|181
7UNV|1|A|A|182
7UNV|1|A|C|183
*
7UNV|1|A|G|214
7UNV|1|A|G|215
7UNV|1|A|A|216
7UNV|1|A|A|217
7UNV|1|A|A|218
7UNV|1|A|A|219
7UNV|1|A|G|220
7UNV|1|A|A|221
7UNV|1|A|A|222
7UNV|1|A|A|223
7UNV|1|A|U|224
*
7UNV|1|A|A|231
7UNV|1|A|G|232
7UNV|1|A|A|233
7UNV|1|A|U|234
7UNV|1|A|U|235
*
7UNV|1|A|A|262
7UNV|1|A|U|263
7UNV|1|A|U|264
7UNV|1|A|A|265
7UNV|1|A|G|266
*
7UNV|1|A|C|417
7UNV|1|A|U|418
7UNV|1|A|A|419
7UNV|1|A|A|420
7UNV|1|A|A|421
7UNV|1|A|U|422
7UNV|1|A|A|423
7UNV|1|A|C|424

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34