J6_7ZJW_002
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 7ZJW|1|L5|C|1456, 7ZJW|1|L5|G|1457
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZJW|1|L5|C|1296
7ZJW|1|L5|G|1297
7ZJW|1|L5|A|1298
7ZJW|1|L5|G|1299
*
7ZJW|1|L5|C|1328
7ZJW|1|L5|G|1329
7ZJW|1|L5|C|1330
7ZJW|1|L5|A|1331
7ZJW|1|L5|A|1332
*
7ZJW|1|L5|U|1339
7ZJW|1|L5|G|1340
7ZJW|1|L5|A|1341
7ZJW|1|L5|A|1342
7ZJW|1|L5|G|1343
*
7ZJW|1|L5|C|1373
7ZJW|1|L5|G|1374
7ZJW|1|L5|A|1375
7ZJW|1|L5|G|1376
*
7ZJW|1|L5|C|1419
7ZJW|1|L5|G|1420
7ZJW|1|L5|G|1421
*
7ZJW|1|L5|C|1454
7ZJW|1|L5|A|1455
7ZJW|1|L5|C|1456
7ZJW|1|L5|G|1457
7ZJW|1|L5|A|1458
7ZJW|1|L5|G|1459
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4
- Chain LO
- 60S ribosomal protein eL13
- Chain LT
- 60S ribosomal Protein eL18
- Chain Ld
- 60S ribosomal protein L27a
- Chain Le
- 60S ribosomal protein L29
- Chain Ll
- 60S ribosomal protein L36
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