J6_7ZQ5_001

3D structure

PDB id

7ZQ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with truncated uL23 and uL24 loops

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

7ZQ5|1|b|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZQ5|1|b|G|45
7ZQ5|1|b|G|46
*
7ZQ5|1|b|C|179
7ZQ5|1|b|G|180
7ZQ5|1|b|A|181
7ZQ5|1|b|A|182
7ZQ5|1|b|C|183
*
7ZQ5|1|b|G|214
7ZQ5|1|b|G|215
7ZQ5|1|b|A|216
7ZQ5|1|b|A|217
7ZQ5|1|b|A|218
7ZQ5|1|b|A|219
7ZQ5|1|b|G|220
7ZQ5|1|b|A|221
7ZQ5|1|b|A|222
7ZQ5|1|b|A|223
7ZQ5|1|b|U|224
*
7ZQ5|1|b|A|231
7ZQ5|1|b|G|232
7ZQ5|1|b|A|233
7ZQ5|1|b|U|234
7ZQ5|1|b|U|235
*
7ZQ5|1|b|A|262
7ZQ5|1|b|G|263
7ZQ5|1|b|C|264
7ZQ5|1|b|A|265
7ZQ5|1|b|G|266
*
7ZQ5|1|b|C|426
7ZQ5|1|b|U|427
7ZQ5|1|b|A|428
7ZQ5|1|b|A|429
7ZQ5|1|b|A|430
7ZQ5|1|b|U|431
7ZQ5|1|b|A|432
7ZQ5|1|b|C|433

Current chains

Chain b

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L34