J6_8B0X_001

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8B0X|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J6_56891.1

Basepair signature

cWW-cSS-cWW-cSS-tWW-F-tWW-F-F-cWW-tSS-tHW-cWW-cWW-cSS-F-F-tHS-F-cWW-cSS-cSS-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8B0X|1|a|G|45
8B0X|1|a|G|46
*
8B0X|1|a|C|179
8B0X|1|a|G|180
8B0X|1|a|A|181
8B0X|1|a|A|182
8B0X|1|a|C|183
*
8B0X|1|a|G|214
8B0X|1|a|G|215
8B0X|1|a|A|216
8B0X|1|a|A|217
8B0X|1|a|A|218
8B0X|1|a|A|219
8B0X|1|a|G|220
8B0X|1|a|A|221
8B0X|1|a|A|222
8B0X|1|a|A|223
8B0X|1|a|U|224
*
8B0X|1|a|A|231
8B0X|1|a|G|232
8B0X|1|a|A|233
8B0X|1|a|U|234
8B0X|1|a|U|235
*
8B0X|1|a|A|262
8B0X|1|a|G|263
8B0X|1|a|C|264
8B0X|1|a|A|265
8B0X|1|a|G|266
*
8B0X|1|a|C|426
8B0X|1|a|U|427
8B0X|1|a|A|428
8B0X|1|a|A|429
8B0X|1|a|A|430
8B0X|1|a|U|431
8B0X|1|a|A|432
8B0X|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34