J6_8C91_001

3D structure

PDB id

8C91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.19 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

8C91|1|A|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C91|1|A|G|45
8C91|1|A|G|46
*
8C91|1|A|C|179
8C91|1|A|G|180
8C91|1|A|A|181
8C91|1|A|A|182
8C91|1|A|C|183
*
8C91|1|A|G|214
8C91|1|A|G|215
8C91|1|A|A|216
8C91|1|A|A|217
8C91|1|A|A|218
8C91|1|A|A|219
8C91|1|A|G|220
8C91|1|A|A|221
8C91|1|A|A|222
8C91|1|A|A|223
8C91|1|A|U|224
8C91|1|A|C|225
*
8C91|1|A|G|230
8C91|1|A|A|231
8C91|1|A|G|232
8C91|1|A|A|233
8C91|1|A|U|234
8C91|1|A|U|235
*
8C91|1|A|A|262
8C91|1|A|G|263
8C91|1|A|C|264
8C91|1|A|A|265
8C91|1|A|G|266
*
8C91|1|A|C|426
8C91|1|A|U|427
8C91|1|A|A|428
8C91|1|A|A|429
8C91|1|A|A|430
8C91|1|A|U|431
8C91|1|A|A|432
8C91|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34