J6_8C93_001

3D structure

PDB id

8C93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

8C93|1|A|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C93|1|A|G|45
8C93|1|A|G|46
*
8C93|1|A|C|179
8C93|1|A|G|180
8C93|1|A|A|181
8C93|1|A|A|182
8C93|1|A|C|183
*
8C93|1|A|G|215
8C93|1|A|A|216
8C93|1|A|A|217
8C93|1|A|A|218
8C93|1|A|A|219
8C93|1|A|G|220
8C93|1|A|A|221
8C93|1|A|A|222
8C93|1|A|A|223
8C93|1|A|U|224
*
8C93|1|A|A|231
8C93|1|A|G|232
8C93|1|A|A|233
8C93|1|A|U|234
8C93|1|A|U|235
*
8C93|1|A|A|262
8C93|1|A|G|263
8C93|1|A|C|264
8C93|1|A|A|265
8C93|1|A|G|266
*
8C93|1|A|C|426
8C93|1|A|U|427
8C93|1|A|A|428
8C93|1|A|A|429
8C93|1|A|A|430
8C93|1|A|U|431
8C93|1|A|A|432
8C93|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34