J6_8C95_001

3D structure

PDB id

8C95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.92 Å

Loop

Sequence

GG*CGAACC*GAGGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

39 nucleotides

Bulged bases

8C95|1|A|A|223, 8C95|1|A|C|264, 8C95|1|A|U|431

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C95|1|A|G|45
8C95|1|A|G|46
*
8C95|1|A|C|179
8C95|1|A|G|180
8C95|1|A|A|181
8C95|1|A|A|182
8C95|1|A|C|183
8C95|1|A|C|184
*
8C95|1|A|G|212
8C95|1|A|A|213
8C95|1|A|G|214
8C95|1|A|G|215
8C95|1|A|A|216
8C95|1|A|A|217
8C95|1|A|A|218
8C95|1|A|A|219
8C95|1|A|G|220
8C95|1|A|A|221
8C95|1|A|A|222
8C95|1|A|A|223
8C95|1|A|U|224
*
8C95|1|A|A|231
8C95|1|A|G|232
8C95|1|A|A|233
8C95|1|A|U|234
8C95|1|A|U|235
*
8C95|1|A|A|262
8C95|1|A|G|263
8C95|1|A|C|264
8C95|1|A|A|265
8C95|1|A|G|266
*
8C95|1|A|C|426
8C95|1|A|U|427
8C95|1|A|A|428
8C95|1|A|A|429
8C95|1|A|A|430
8C95|1|A|U|431
8C95|1|A|A|432
8C95|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34