J6_8C96_001

3D structure

PDB id

8C96 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

4.43 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

8C96|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C96|1|A|G|45
8C96|1|A|G|46
*
8C96|1|A|C|179
8C96|1|A|G|180
8C96|1|A|A|181
8C96|1|A|A|182
8C96|1|A|C|183
*
8C96|1|A|G|215
8C96|1|A|A|216
8C96|1|A|A|217
8C96|1|A|A|218
8C96|1|A|A|219
8C96|1|A|G|220
8C96|1|A|A|221
8C96|1|A|A|222
8C96|1|A|A|223
8C96|1|A|U|224
*
8C96|1|A|A|231
8C96|1|A|G|232
8C96|1|A|A|233
8C96|1|A|U|234
8C96|1|A|U|235
*
8C96|1|A|A|262
8C96|1|A|G|263
8C96|1|A|C|264
8C96|1|A|A|265
8C96|1|A|G|266
*
8C96|1|A|C|426
8C96|1|A|U|427
8C96|1|A|A|428
8C96|1|A|A|429
8C96|1|A|A|430
8C96|1|A|U|431
8C96|1|A|A|432
8C96|1|A|C|433

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34