J6_8CAM_001

3D structure

PDB id

8CAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evernimicin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.86 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8CAM|1|a|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CAM|1|a|G|45
8CAM|1|a|G|46
*
8CAM|1|a|C|179
8CAM|1|a|G|180
8CAM|1|a|A|181
8CAM|1|a|A|182
8CAM|1|a|C|183
*
8CAM|1|a|G|214
8CAM|1|a|G|215
8CAM|1|a|A|216
8CAM|1|a|A|217
8CAM|1|a|A|218
8CAM|1|a|A|219
8CAM|1|a|G|220
8CAM|1|a|A|221
8CAM|1|a|A|222
8CAM|1|a|A|223
8CAM|1|a|U|224
*
8CAM|1|a|A|231
8CAM|1|a|G|232
8CAM|1|a|A|233
8CAM|1|a|U|234
8CAM|1|a|U|235
*
8CAM|1|a|A|262
8CAM|1|a|G|263
8CAM|1|a|C|264
8CAM|1|a|A|265
8CAM|1|a|G|266
*
8CAM|1|a|C|426
8CAM|1|a|U|427
8CAM|1|a|A|428
8CAM|1|a|A|429
8CAM|1|a|A|430
8CAM|1|a|U|431
8CAM|1|a|A|432
8CAM|1|a|C|433

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34