J6_8CRX_002
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GACUAGUGAUCU*ACUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 8CRX|1|a|U|2258, 8CRX|1|a|A|2570, 8CRX|1|a|U|2572, 8CRX|1|a|G|2610, 8CRX|1|a|A|2612, 8CRX|1|a|U|2613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CRX|1|a|U|2256
8CRX|1|a|U|2257
8CRX|1|a|U|2258
8CRX|1|a|A|2259
*
8CRX|1|a|U|2425
8CRX|1|a|U|2426
8CRX|1|a|U|2427
8CRX|1|a|G|2428
*
8CRX|1|a|C|2440
8CRX|1|a|G|2441
*
8CRX|1|a|C|2463
8CRX|1|a|G|2464
8CRX|1|a|C|2465
8CRX|1|a|C|2466
*
8CRX|1|a|G|2566
8CRX|1|a|A|2567
8CRX|1|a|C|2568
8CRX|1|a|U|2569
8CRX|1|a|A|2570
8CRX|1|a|G|2571
8CRX|1|a|U|2572
8CRX|1|a|G|2573
8CRX|1|a|A|2574
8CRX|1|a|U|2575
8CRX|1|a|C|2576
8CRX|1|a|U|2577
*
8CRX|1|a|A|2603
8CRX|1|a|C|2604
8CRX|1|a|U|2605
8CRX|1|a|C|2606
8CRX|1|a|A|2607
8CRX|1|a|A|2608
8CRX|1|a|C|2609
8CRX|1|a|G|2610
8CRX|1|a|G|2611
8CRX|1|a|A|2612
8CRX|1|a|U|2613
8CRX|1|a|A|2614
8CRX|1|a|A|2615
8CRX|1|a|A|2616
8CRX|1|a|A|2617
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L33
- Chain 2
- 50S ribosomal protein L35
- Chain c
- 50S ribosomal protein L2
- Chain k
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L27
- Chain w
- 50S ribosomal protein L28
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