J6_8ETI_001
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GACUAC*GGAAAAGAAAA*UGAUU*AAAAG*CUAAAUAUUGG*CAUC
- Length
- 42 nucleotides
- Bulged bases
- 8ETI|1|1|A|67, 8ETI|1|1|U|337, 8ETI|1|2|U|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ETI|1|1|G|22
8ETI|1|1|A|23
8ETI|1|1|C|24
8ETI|1|1|U|25
8ETI|1|1|A|26
8ETI|1|1|C|27
*
8ETI|1|1|G|58
8ETI|1|1|G|59
8ETI|1|1|A|60
8ETI|1|1|A|61
8ETI|1|1|A|62
8ETI|1|1|A|63
8ETI|1|1|G|64
8ETI|1|1|A|65
8ETI|1|1|A|66
8ETI|1|1|A|67
8ETI|1|1|A|68
*
8ETI|1|1|U|75
8ETI|1|1|G|76
8ETI|1|1|A|77
8ETI|1|1|U|78
8ETI|1|1|U|79
*
8ETI|1|1|A|106
8ETI|1|1|A|107
8ETI|1|1|A|108
8ETI|1|1|A|109
8ETI|1|1|G|110
*
8ETI|1|1|C|329
8ETI|1|1|U|330
8ETI|1|1|A|331
8ETI|1|1|A|332
8ETI|1|1|A|333
8ETI|1|1|U|334
8ETI|1|1|A|335
8ETI|1|1|U|336
8ETI|1|1|U|337
8ETI|1|1|G|338
8ETI|1|1|G|339
*
8ETI|1|2|C|40
8ETI|1|2|A|41
8ETI|1|2|U|42
8ETI|1|2|C|43
Current chains
- Chain 1
- RNA (1564-MER)
- Chain 2
- RNA (152-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4-B
- Chain L
- 60S ribosomal protein L13
- Chain N
- 60S ribosomal protein L15-A
- Chain h
- 60S ribosomal protein L35
- Chain i
- 60S ribosomal protein L36-B
- Chain j
- 60S ribosomal protein L37-B
- Chain v
- Nucleolar protein 16
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