J6_8FL3_002

3D structure

PDB id

8FL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG

Length

27 nucleotides

Bulged bases

8FL3|1|L3|C|1501, 8FL3|1|L3|G|1502

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL3|1|L3|C|1352
8FL3|1|L3|G|1353
8FL3|1|L3|A|1354
8FL3|1|L3|G|1355
*
8FL3|1|L3|C|1384
8FL3|1|L3|G|1385
8FL3|1|L3|C|1386
8FL3|1|L3|A|1387
8FL3|1|L3|A|1388
*
8FL3|1|L3|U|1395
8FL3|1|L3|G|1396
8FL3|1|L3|A|1397
8FL3|1|L3|A|1398
8FL3|1|L3|G|1399
*
8FL3|1|L3|C|1418
8FL3|1|L3|G|1419
8FL3|1|L3|A|1420
8FL3|1|L3|G|1421
*
8FL3|1|L3|C|1464
8FL3|1|L3|G|1465
8FL3|1|L3|G|1466
*
8FL3|1|L3|C|1499
8FL3|1|L3|A|1500
8FL3|1|L3|C|1501
8FL3|1|L3|G|1502
8FL3|1|L3|A|1503
8FL3|1|L3|G|1504

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain LB

60S ribosomal protein L18

Chain LK

60S ribosomal protein L27a

Chain LU

60S ribosomal protein L36

Chain SA

60S ribosomal protein L4