J6_8G31_001

3D structure

PDB id

8G31 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8G31|1|B|A|223, 8G31|1|B|A|265

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G31|1|B|G|45
8G31|1|B|G|46
*
8G31|1|B|C|179
8G31|1|B|G|180
8G31|1|B|A|181
8G31|1|B|A|182
8G31|1|B|C|183
*
8G31|1|B|G|214
8G31|1|B|G|215
8G31|1|B|A|216
8G31|1|B|A|217
8G31|1|B|A|218
8G31|1|B|A|219
8G31|1|B|G|220
8G31|1|B|A|221
8G31|1|B|A|222
8G31|1|B|A|223
8G31|1|B|U|224
*
8G31|1|B|A|231
8G31|1|B|G|232
8G31|1|B|A|233
8G31|1|B|U|234
8G31|1|B|U|235
*
8G31|1|B|A|262
8G31|1|B|G|263
8G31|1|B|C|264
8G31|1|B|A|265
8G31|1|B|G|266
*
8G31|1|B|C|426
8G31|1|B|U|427
8G31|1|B|A|428
8G31|1|B|A|429
8G31|1|B|A|430
8G31|1|B|U|431
8G31|1|B|A|432
8G31|1|B|C|433

Current chains

Chain B

23S

Nearby chains

Chain 2

50S ribosomal protein L34