J6_8PKL_001

3D structure

PDB id

8PKL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8PKL|1|7|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PKL|1|7|G|45
8PKL|1|7|G|46
*
8PKL|1|7|C|179
8PKL|1|7|G|180
8PKL|1|7|A|181
8PKL|1|7|A|182
8PKL|1|7|C|183
*
8PKL|1|7|G|214
8PKL|1|7|G|215
8PKL|1|7|A|216
8PKL|1|7|A|217
8PKL|1|7|A|218
8PKL|1|7|A|219
8PKL|1|7|G|220
8PKL|1|7|A|221
8PKL|1|7|A|222
8PKL|1|7|A|223
8PKL|1|7|U|224
*
8PKL|1|7|A|231
8PKL|1|7|G|232
8PKL|1|7|A|233
8PKL|1|7|U|234
8PKL|1|7|U|235
*
8PKL|1|7|A|262
8PKL|1|7|G|263
8PKL|1|7|C|264
8PKL|1|7|A|265
8PKL|1|7|G|266
*
8PKL|1|7|C|426
8PKL|1|7|U|427
8PKL|1|7|A|428
8PKL|1|7|A|429
8PKL|1|7|A|430
8PKL|1|7|U|431
8PKL|1|7|A|432
8PKL|1|7|C|433

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L34