J6_8R55_001

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GC*GCAGAC*GAAGAGAAAG*CGAUU*AUCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

8R55|1|X|G|184, 8R55|1|X|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R55|1|X|G|45
8R55|1|X|C|46
*
8R55|1|X|G|181
8R55|1|X|C|182
8R55|1|X|A|183
8R55|1|X|G|184
8R55|1|X|A|185
8R55|1|X|C|186
*
8R55|1|X|G|218
8R55|1|X|A|219
8R55|1|X|A|220
8R55|1|X|G|221
8R55|1|X|A|222
8R55|1|X|G|223
8R55|1|X|A|224
8R55|1|X|A|225
8R55|1|X|A|226
8R55|1|X|G|227
*
8R55|1|X|C|234
8R55|1|X|G|235
8R55|1|X|A|236
8R55|1|X|U|237
8R55|1|X|U|238
*
8R55|1|X|A|265
8R55|1|X|U|266
8R55|1|X|C|267
8R55|1|X|A|268
8R55|1|X|G|269
*
8R55|1|X|C|473
8R55|1|X|U|474
8R55|1|X|A|475
8R55|1|X|A|476
8R55|1|X|A|477
8R55|1|X|U|478
8R55|1|X|A|479
8R55|1|X|C|480

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain b

Large ribosomal subunit protein uL4