J6_8R55_003
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCUUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 8R55|1|X|U|2105, 8R55|1|X|A|2417, 8R55|1|X|U|2419, 8R55|1|X|G|2457, 8R55|1|X|A|2459, 8R55|1|X|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R55|1|X|U|2103
8R55|1|X|U|2104
8R55|1|X|U|2105
8R55|1|X|A|2106
*
8R55|1|X|U|2272
8R55|1|X|U|2273
8R55|1|X|U|2274
8R55|1|X|G|2275
*
8R55|1|X|C|2287
8R55|1|X|G|2288
*
8R55|1|X|C|2310
8R55|1|X|G|2311
8R55|1|X|C|2312
8R55|1|X|C|2313
*
8R55|1|X|G|2413
8R55|1|X|C|2414
8R55|1|X|U|2415
8R55|1|X|U|2416
8R55|1|X|A|2417
8R55|1|X|G|2418
8R55|1|X|U|2419
8R55|1|X|G|2420
8R55|1|X|A|2421
8R55|1|X|U|2422
8R55|1|X|C|2423
8R55|1|X|C|2424
*
8R55|1|X|G|2450
8R55|1|X|C|2451
8R55|1|X|U|2452
8R55|1|X|C|2453
8R55|1|X|A|2454
8R55|1|X|A|2455
8R55|1|X|C|2456
8R55|1|X|G|2457
8R55|1|X|G|2458
8R55|1|X|A|2459
8R55|1|X|U|2460
8R55|1|X|A|2461
8R55|1|X|A|2462
8R55|1|X|A|2463
8R55|1|X|A|2464
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL33
- Chain 3
- Large ribosomal subunit protein bL35
- Chain Z
- Large ribosomal subunit protein uL2
- Chain i
- 50S ribosomal protein L15
- Chain u
- Large ribosomal subunit protein bL27
- Chain v
- Large ribosomal subunit protein bL28
Coloring options: