J6_8T5H_001
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 8T5H|1|B|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T5H|1|B|G|45
8T5H|1|B|G|46
*
8T5H|1|B|C|179
8T5H|1|B|G|180
8T5H|1|B|A|181
8T5H|1|B|A|182
8T5H|1|B|C|183
*
8T5H|1|B|G|214
8T5H|1|B|G|215
8T5H|1|B|A|216
8T5H|1|B|A|217
8T5H|1|B|A|218
8T5H|1|B|A|219
8T5H|1|B|G|220
8T5H|1|B|A|221
8T5H|1|B|A|222
8T5H|1|B|A|223
8T5H|1|B|U|224
*
8T5H|1|B|A|231
8T5H|1|B|G|232
8T5H|1|B|A|233
8T5H|1|B|U|234
8T5H|1|B|U|235
*
8T5H|1|B|A|262
8T5H|1|B|G|263
8T5H|1|B|C|264
8T5H|1|B|A|265
8T5H|1|B|G|266
*
8T5H|1|B|C|426
8T5H|1|B|U|427
8T5H|1|B|A|428
8T5H|1|B|A|429
8T5H|1|B|A|430
8T5H|1|B|U|431
8T5H|1|B|A|432
8T5H|1|B|C|433
Current chains
- Chain B
- 23S
Nearby chains
- Chain 2
- 50S ribosomal protein L34
Coloring options: