J6_8URX_001
3D structure
- PDB id
- 8URX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, mRNA with a 30 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.6 Å
Loop
- Sequence
- GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC
- Length
- 36 nucleotides
- Bulged bases
- 8URX|1|a|A|223
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8URX|1|a|G|45
8URX|1|a|G|46
*
8URX|1|a|C|179
8URX|1|a|G|180
8URX|1|a|A|181
8URX|1|a|A|182
8URX|1|a|C|183
*
8URX|1|a|G|214
8URX|1|a|G|215
8URX|1|a|A|216
8URX|1|a|A|217
8URX|1|a|A|218
8URX|1|a|A|219
8URX|1|a|G|220
8URX|1|a|A|221
8URX|1|a|A|222
8URX|1|a|A|223
8URX|1|a|U|224
*
8URX|1|a|A|231
8URX|1|a|G|232
8URX|1|a|A|233
8URX|1|a|U|234
8URX|1|a|U|235
*
8URX|1|a|A|262
8URX|1|a|G|263
8URX|1|a|C|264
8URX|1|a|A|265
8URX|1|a|G|266
*
8URX|1|a|C|426
8URX|1|a|U|427
8URX|1|a|A|428
8URX|1|a|A|429
8URX|1|a|A|430
8URX|1|a|U|431
8URX|1|a|A|432
8URX|1|a|C|433
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L34
Coloring options: