J6_8VVT_002
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAG*CGCAA*UGAAG*CGAG*CGG*CACGAG
- Length
- 27 nucleotides
- Bulged bases
- 8VVT|1|WA|C|1506, 8VVT|1|WA|G|1507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|C|1358
8VVT|1|WA|G|1359
8VVT|1|WA|A|1360
8VVT|1|WA|G|1361
*
8VVT|1|WA|C|1390
8VVT|1|WA|G|1391
8VVT|1|WA|C|1392
8VVT|1|WA|A|1393
8VVT|1|WA|A|1394
*
8VVT|1|WA|U|1401
8VVT|1|WA|G|1402
8VVT|1|WA|A|1403
8VVT|1|WA|A|1404
8VVT|1|WA|G|1405
*
8VVT|1|WA|C|1424
8VVT|1|WA|G|1425
8VVT|1|WA|A|1426
8VVT|1|WA|G|1427
*
8VVT|1|WA|C|1469
8VVT|1|WA|G|1470
8VVT|1|WA|G|1471
*
8VVT|1|WA|C|1504
8VVT|1|WA|A|1505
8VVT|1|WA|C|1506
8VVT|1|WA|G|1507
8VVT|1|WA|A|1508
8VVT|1|WA|G|1509
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- eL29
- Chain C
- uL4
- Chain HA
- L36
- Chain K
- eL13
- Chain P
- eL18
- Chain Z
- uL15
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