J6_8WV1_003
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- UUUA*UUUG*CG*CGCC*GCCUAGUGAACC*GAUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 8WV1|1|A|U|2098, 8WV1|1|A|U|2402, 8WV1|1|A|G|2440, 8WV1|1|A|A|2442
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WV1|1|A|U|2096
8WV1|1|A|U|2097
8WV1|1|A|U|2098
8WV1|1|A|A|2099
*
8WV1|1|A|U|2255
8WV1|1|A|U|2256
8WV1|1|A|U|2257
8WV1|1|A|G|2258
*
8WV1|1|A|C|2270
8WV1|1|A|G|2271
*
8WV1|1|A|C|2293
8WV1|1|A|G|2294
8WV1|1|A|C|2295
8WV1|1|A|C|2296
*
8WV1|1|A|G|2396
8WV1|1|A|C|2397
8WV1|1|A|C|2398
8WV1|1|A|U|2399
8WV1|1|A|A|2400
8WV1|1|A|G|2401
8WV1|1|A|U|2402
8WV1|1|A|G|2403
8WV1|1|A|A|2404
8WV1|1|A|A|2405
8WV1|1|A|C|2406
8WV1|1|A|C|2407
*
8WV1|1|A|G|2433
8WV1|1|A|A|2434
8WV1|1|A|U|2435
8WV1|1|A|C|2436
8WV1|1|A|A|2437
8WV1|1|A|A|2438
8WV1|1|A|C|2439
8WV1|1|A|G|2440
8WV1|1|A|G|2441
8WV1|1|A|A|2442
8WV1|1|A|U|2443
8WV1|1|A|A|2444
8WV1|1|A|A|2445
8WV1|1|A|A|2446
8WV1|1|A|A|2447
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 13
- 50S ribosomal protein L33
- Chain 3
- 50S ribosomal protein L35
- Chain C
- 50S ribosomal protein L2
- Chain K
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L25
- Chain V
- Large ribosomal subunit protein bL27
- Chain W
- Large ribosomal subunit protein bL28
Coloring options: