J6_9B50_001

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9B50|1|BA|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B50|1|BA|G|45
9B50|1|BA|G|46
*
9B50|1|BA|C|179
9B50|1|BA|G|180
9B50|1|BA|A|181
9B50|1|BA|A|182
9B50|1|BA|C|183
*
9B50|1|BA|G|214
9B50|1|BA|G|215
9B50|1|BA|A|216
9B50|1|BA|A|217
9B50|1|BA|A|218
9B50|1|BA|A|219
9B50|1|BA|G|220
9B50|1|BA|A|221
9B50|1|BA|A|222
9B50|1|BA|A|223
9B50|1|BA|U|224
*
9B50|1|BA|A|231
9B50|1|BA|G|232
9B50|1|BA|A|233
9B50|1|BA|U|234
9B50|1|BA|U|235
*
9B50|1|BA|A|262
9B50|1|BA|G|263
9B50|1|BA|C|264
9B50|1|BA|A|265
9B50|1|BA|G|266
*
9B50|1|BA|C|426
9B50|1|BA|U|427
9B50|1|BA|A|428
9B50|1|BA|A|429
9B50|1|BA|A|430
9B50|1|BA|U|431
9B50|1|BA|A|432
9B50|1|BA|C|433

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34