J6_9BH5_002
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- CGAG*CGAAA*UAAAG*CGAC*GG*UUGAG
- Length
- 25 nucleotides
- Bulged bases
- 9BH5|1|A5|U|839, 9BH5|1|A5|G|840
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9BH5|1|A5|C|704
9BH5|1|A5|G|705
9BH5|1|A5|A|706
9BH5|1|A5|G|707
*
9BH5|1|A5|C|732
9BH5|1|A5|G|733
9BH5|1|A5|A|734
9BH5|1|A5|A|735
9BH5|1|A5|A|736
*
9BH5|1|A5|U|743
9BH5|1|A5|A|744
9BH5|1|A5|A|745
9BH5|1|A5|A|746
9BH5|1|A5|G|747
*
9BH5|1|A5|C|765
9BH5|1|A5|G|766
9BH5|1|A5|A|767
9BH5|1|A5|C|768
*
9BH5|1|A5|G|804
9BH5|1|A5|G|805
*
9BH5|1|A5|U|838
9BH5|1|A5|U|839
9BH5|1|A5|G|840
9BH5|1|A5|A|841
9BH5|1|A5|G|842
Current chains
- Chain A5
- 28S rRNA
Nearby chains
- Chain CC
- Large ribosomal subunit protein uL4
- Chain CL
- Large ribosomal subunit protein eL13
- Chain CQ
- Large ribosomal subunit protein eL18
- Chain Ca
- Large ribosomal subunit protein uL15
- Chain Cb
- 60S ribosomal protein L29
- Chain Ci
- Large ribosomal subunit protein eL36
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