J6_9E0P_002
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- UUCA*UUUA*UG*CGCC*GACUAGUGAUCC*GCUCAACGGAUAAAA
- Length
- 41 nucleotides
- Bulged bases
- 9E0P|1|A|C|2299, 9E0P|1|A|U|2614, 9E0P|1|A|U|2647, 9E0P|1|A|G|2652, 9E0P|1|A|A|2654, 9E0P|1|A|U|2655, 9E0P|1|A|A|2658
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9E0P|1|A|U|2297
9E0P|1|A|U|2298
9E0P|1|A|C|2299
9E0P|1|A|A|2300
*
9E0P|1|A|U|2467
9E0P|1|A|U|2468
9E0P|1|A|U|2469
9E0P|1|A|A|2470
*
9E0P|1|A|U|2482
9E0P|1|A|G|2483
*
9E0P|1|A|C|2505
9E0P|1|A|G|2506
9E0P|1|A|C|2507
9E0P|1|A|C|2508
*
9E0P|1|A|G|2608
9E0P|1|A|A|2609
9E0P|1|A|C|2610
9E0P|1|A|U|2611
9E0P|1|A|A|2612
9E0P|1|A|G|2613
9E0P|1|A|U|2614
9E0P|1|A|G|2615
9E0P|1|A|A|2616
9E0P|1|A|U|2617
9E0P|1|A|C|2618
9E0P|1|A|C|2619
*
9E0P|1|A|G|2645
9E0P|1|A|C|2646
9E0P|1|A|U|2647
9E0P|1|A|C|2648
9E0P|1|A|A|2649
9E0P|1|A|A|2650
9E0P|1|A|C|2651
9E0P|1|A|G|2652
9E0P|1|A|G|2653
9E0P|1|A|A|2654
9E0P|1|A|U|2655
9E0P|1|A|A|2656
9E0P|1|A|A|2657
9E0P|1|A|A|2658
9E0P|1|A|A|2659
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL33A
- Chain 6
- Large ribosomal subunit protein bL35
- Chain C
- Large ribosomal subunit protein uL2
- Chain M
- Large ribosomal subunit protein uL15
- Chain X
- Large ribosomal subunit protein bL27
- Chain Y
- Large ribosomal subunit protein bL28
Coloring options: