J6_9E1S_001

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

GC*GGAAC*GGAGGAGAAAA*UGAUU*AACAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9E1S|1|I|A|225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|G|45
9E1S|1|I|C|46
*
9E1S|1|I|G|181
9E1S|1|I|G|182
9E1S|1|I|A|183
9E1S|1|I|A|184
9E1S|1|I|C|185
*
9E1S|1|I|G|216
9E1S|1|I|G|217
9E1S|1|I|A|218
9E1S|1|I|G|219
9E1S|1|I|G|220
9E1S|1|I|A|221
9E1S|1|I|G|222
9E1S|1|I|A|223
9E1S|1|I|A|224
9E1S|1|I|A|225
9E1S|1|I|A|226
*
9E1S|1|I|U|233
9E1S|1|I|G|234
9E1S|1|I|A|235
9E1S|1|I|U|236
9E1S|1|I|U|237
*
9E1S|1|I|A|264
9E1S|1|I|A|265
9E1S|1|I|C|266
9E1S|1|I|A|267
9E1S|1|I|G|268
*
9E1S|1|I|C|515
9E1S|1|I|U|516
9E1S|1|I|A|517
9E1S|1|I|A|518
9E1S|1|I|A|519
9E1S|1|I|U|520
9E1S|1|I|A|521
9E1S|1|I|C|522

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein bL34