J6_9GHH_001

3D structure

PDB id

9GHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GC*GCACAC*GGAAGAGAAAG*CGAUU*AAGAG*CUAAAUAC

Length

37 nucleotides

Bulged bases

9GHH|1|A|C|184, 9GHH|1|A|A|226

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHH|1|A|G|45
9GHH|1|A|C|46
*
9GHH|1|A|G|181
9GHH|1|A|C|182
9GHH|1|A|A|183
9GHH|1|A|C|184
9GHH|1|A|A|185
9GHH|1|A|C|186
*
9GHH|1|A|G|217
9GHH|1|A|G|218
9GHH|1|A|A|219
9GHH|1|A|A|220
9GHH|1|A|G|221
9GHH|1|A|A|222
9GHH|1|A|G|223
9GHH|1|A|A|224
9GHH|1|A|A|225
9GHH|1|A|A|226
9GHH|1|A|G|227
*
9GHH|1|A|C|234
9GHH|1|A|G|235
9GHH|1|A|A|236
9GHH|1|A|U|237
9GHH|1|A|U|238
*
9GHH|1|A|A|265
9GHH|1|A|A|266
9GHH|1|A|G|267
9GHH|1|A|A|268
9GHH|1|A|G|269
*
9GHH|1|A|C|472
9GHH|1|A|U|473
9GHH|1|A|A|474
9GHH|1|A|A|475
9GHH|1|A|A|476
9GHH|1|A|U|477
9GHH|1|A|A|478
9GHH|1|A|C|479

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34