J6_9H3P_001

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9H3P|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3P|1|A|G|45
9H3P|1|A|G|46
*
9H3P|1|A|C|179
9H3P|1|A|G|180
9H3P|1|A|A|181
9H3P|1|A|A|182
9H3P|1|A|C|183
*
9H3P|1|A|G|214
9H3P|1|A|G|215
9H3P|1|A|A|216
9H3P|1|A|A|217
9H3P|1|A|A|218
9H3P|1|A|A|219
9H3P|1|A|G|220
9H3P|1|A|A|221
9H3P|1|A|A|222
9H3P|1|A|A|223
9H3P|1|A|U|224
*
9H3P|1|A|A|231
9H3P|1|A|G|232
9H3P|1|A|A|233
9H3P|1|A|U|234
9H3P|1|A|U|235
*
9H3P|1|A|A|262
9H3P|1|A|G|263
9H3P|1|A|C|264
9H3P|1|A|A|265
9H3P|1|A|G|266
*
9H3P|1|A|C|426
9H3P|1|A|U|427
9H3P|1|A|A|428
9H3P|1|A|A|429
9H3P|1|A|A|430
9H3P|1|A|U|431
9H3P|1|A|A|432
9H3P|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34