J6_9H3Q_001

3D structure

PDB id

9H3Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_YjgA_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

4.02 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

9H3Q|1|A|A|223, 9H3Q|1|A|C|264

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3Q|1|A|G|45
9H3Q|1|A|G|46
*
9H3Q|1|A|C|179
9H3Q|1|A|G|180
9H3Q|1|A|A|181
9H3Q|1|A|A|182
9H3Q|1|A|C|183
*
9H3Q|1|A|G|214
9H3Q|1|A|G|215
9H3Q|1|A|A|216
9H3Q|1|A|A|217
9H3Q|1|A|A|218
9H3Q|1|A|A|219
9H3Q|1|A|G|220
9H3Q|1|A|A|221
9H3Q|1|A|A|222
9H3Q|1|A|A|223
9H3Q|1|A|U|224
9H3Q|1|A|C|225
*
9H3Q|1|A|G|230
9H3Q|1|A|A|231
9H3Q|1|A|G|232
9H3Q|1|A|A|233
9H3Q|1|A|U|234
9H3Q|1|A|U|235
*
9H3Q|1|A|A|262
9H3Q|1|A|G|263
9H3Q|1|A|C|264
9H3Q|1|A|A|265
9H3Q|1|A|G|266
*
9H3Q|1|A|C|426
9H3Q|1|A|U|427
9H3Q|1|A|A|428
9H3Q|1|A|A|429
9H3Q|1|A|A|430
9H3Q|1|A|U|431
9H3Q|1|A|A|432
9H3Q|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34