J6_9HA4_001

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAUC*GAGAUU*AGCAG*CUAAAUAC

Length

38 nucleotides

Bulged bases

9HA4|1|A|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA4|1|A|G|45
9HA4|1|A|G|46
*
9HA4|1|A|C|179
9HA4|1|A|G|180
9HA4|1|A|A|181
9HA4|1|A|A|182
9HA4|1|A|C|183
*
9HA4|1|A|G|214
9HA4|1|A|G|215
9HA4|1|A|A|216
9HA4|1|A|A|217
9HA4|1|A|A|218
9HA4|1|A|A|219
9HA4|1|A|G|220
9HA4|1|A|A|221
9HA4|1|A|A|222
9HA4|1|A|A|223
9HA4|1|A|U|224
9HA4|1|A|C|225
*
9HA4|1|A|G|230
9HA4|1|A|A|231
9HA4|1|A|G|232
9HA4|1|A|A|233
9HA4|1|A|U|234
9HA4|1|A|U|235
*
9HA4|1|A|A|262
9HA4|1|A|G|263
9HA4|1|A|C|264
9HA4|1|A|A|265
9HA4|1|A|G|266
*
9HA4|1|A|C|426
9HA4|1|A|U|427
9HA4|1|A|A|428
9HA4|1|A|A|429
9HA4|1|A|A|430
9HA4|1|A|U|431
9HA4|1|A|A|432
9HA4|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34