J6_9HAM_001

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

GG*CGAAC*GAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

35 nucleotides

Bulged bases

9HAM|1|A|A|223

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAM|1|A|G|45
9HAM|1|A|G|46
*
9HAM|1|A|C|179
9HAM|1|A|G|180
9HAM|1|A|A|181
9HAM|1|A|A|182
9HAM|1|A|C|183
*
9HAM|1|A|G|215
9HAM|1|A|A|216
9HAM|1|A|A|217
9HAM|1|A|A|218
9HAM|1|A|A|219
9HAM|1|A|G|220
9HAM|1|A|A|221
9HAM|1|A|A|222
9HAM|1|A|A|223
9HAM|1|A|U|224
*
9HAM|1|A|A|231
9HAM|1|A|G|232
9HAM|1|A|A|233
9HAM|1|A|U|234
9HAM|1|A|U|235
*
9HAM|1|A|A|262
9HAM|1|A|G|263
9HAM|1|A|C|264
9HAM|1|A|A|265
9HAM|1|A|G|266
*
9HAM|1|A|C|426
9HAM|1|A|U|427
9HAM|1|A|A|428
9HAM|1|A|A|429
9HAM|1|A|A|430
9HAM|1|A|U|431
9HAM|1|A|A|432
9HAM|1|A|C|433

Current chains

Chain A

23S ribosomal RNA

Nearby chains