J6_9I3L_001

3D structure

PDB id

9I3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*CGAAC*GGAAAAGAAAU*AGAUU*AGCAG*CUAAAUAC

Length

36 nucleotides

Bulged bases

9I3L|1|b|A|223

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I3L|1|b|G|45
9I3L|1|b|G|46
*
9I3L|1|b|C|179
9I3L|1|b|G|180
9I3L|1|b|A|181
9I3L|1|b|A|182
9I3L|1|b|C|183
*
9I3L|1|b|G|214
9I3L|1|b|G|215
9I3L|1|b|A|216
9I3L|1|b|A|217
9I3L|1|b|A|218
9I3L|1|b|A|219
9I3L|1|b|G|220
9I3L|1|b|A|221
9I3L|1|b|A|222
9I3L|1|b|A|223
9I3L|1|b|U|224
*
9I3L|1|b|A|231
9I3L|1|b|G|232
9I3L|1|b|A|233
9I3L|1|b|U|234
9I3L|1|b|U|235
*
9I3L|1|b|A|262
9I3L|1|b|G|263
9I3L|1|b|C|264
9I3L|1|b|A|265
9I3L|1|b|G|266
*
9I3L|1|b|C|426
9I3L|1|b|U|427
9I3L|1|b|A|428
9I3L|1|b|A|429
9I3L|1|b|A|430
9I3L|1|b|U|431
9I3L|1|b|A|432
9I3L|1|b|C|433

Current chains

Chain b

23S rRNA

Nearby chains

Chain 6

Large ribosomal subunit protein bL34